{"id":1931,"date":"2023-03-20T00:29:15","date_gmt":"2023-03-19T23:29:15","guid":{"rendered":"https:\/\/archive.belbi.bg.ac.rs\/2023\/?page_id=1931"},"modified":"2023-07-14T16:35:08","modified_gmt":"2023-07-14T15:35:08","slug":"program","status":"publish","type":"page","link":"https:\/\/archive.belbi.bg.ac.rs\/2023\/program\/","title":{"rendered":"Final Program"},"content":{"rendered":"\n

Monday, June 19, 2023<\/h2>\n\n\n\n
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09:00-11:00<\/p>\n<\/div>\n\n\n\n

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Registration<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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11:00-11:30<\/p>\n<\/div>\n\n\n\n

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Opening Ceremony<\/strong>, Hall Nikola Tesla 1<\/p>\n<\/div>\n<\/div>\n\n\n\n

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11:30-12:30<\/p>\n<\/div>\n\n\n\n

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Keynote lecture<\/strong>, Hall Nikola Tesla 1
Prof. Dr. Ewan Birney (online)
Big Data in Biology: How EMBL delivers big data for biology, and some highlights of its application to human disease<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

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12:30-13:30<\/p>\n<\/div>\n\n\n\n

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Keynote lecture<\/strong>, Hall Nikola Tesla 1<\/p>\n\n\n\n

Prof. Dr. Kristel Van Steen<\/p>\n\n\n\n

A tale of two stories: data-driven precision medicine and precision public health<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

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13:30-14:30<\/p>\n<\/div>\n\n\n\n

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Foody Coffee<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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14:30-15:30<\/p>\n<\/div>\n\n\n\n

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Keynote lecture<\/strong>, Hall Nikola Tesla 1<\/p>\n\n\n\n

Prof. Dr. Carlo Cannistraci
Machine intelligence and network science for complex systems big data analysis<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

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15:30-16:00<\/p>\n<\/div>\n\n\n\n

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Sponsors exibition viewing<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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16:00-17:30<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/p>\n\n\n\n

Single cell omics<\/strong>, Hall Nikola Tesla 1<\/span>

\"\"16:00-16:30 Vladimir Brusic, Prediction of cell types using single-cell mRNA profiles<\/a>
\"\"16:30-16:45 Ur\u0161ula Prosenc, Exploration of Pharmacogenomic Biomarkers in Chronic Immune Diseases Using Single-Cell RNA Sequencing<\/a>
\"\"16:45-17:00 Nevena Milivojevi\u0107, Single cell 3` transcriptome profiling<\/a>
\"\"17:00-17:15 Sponsor session<\/em> 10X Genomics<\/div>\n\n\n\n

Computational systems biology<\/strong>, Hall Nikola Tesla 2<\/span>

\"\"16:00-16:30 Konstantin Severinov, Stochastic variation of intracellular amounts of restriction-modification enzymes allows phages to overcome the RM defence<\/a>
\"\"16:30-16:50 Marko Djordjevic, Modulating Horizontal Gene Transfer through Bistability in the Dynamics of Bacterial Restriction-Modification Systems<\/a>
\"\"16:50-17:10 Bogdan Kirillov, The use of Active Machine Learning for Protospacer-Adjacent Motif recovery in Class 2 CRISPR-Cas systems<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n
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17:30-19:30<\/p>\n<\/div>\n\n\n\n

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City tour Monday<\/a><\/em><\/p>\n<\/div>\n<\/div>\n\n\n\n

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20:30-23:30<\/p>\n<\/div>\n\n\n\n

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Welcome Coctail<\/strong>, Hall Nikola Tesla 1<\/p>\n<\/div>\n<\/div>\n\n\n\n

Tuesday, June 20, 2023<\/h2>\n\n\n\n
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08:00-09:00<\/p>\n<\/div>\n\n\n\n

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Registration<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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09:00-10:00<\/p>\n<\/div>\n\n\n\n

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Keynote lecture<\/strong>, Hall Nikola Tesla 1
Prof. Dr. Peter Tompa
Targeting LLPS in disease: a new modality in drug development<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

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10:00-11:00<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/p>\n\n\n\n

Omics data<\/strong>, Hall Nikola Tesla 1<\/span>

\"\"10:00-10:30 Natasa Przulj, Omics Data Fusion for Understanding Molecular Complexity Enabling Precision Medicine<\/a>
\"\"10:30-11:00 Noel Malod-Dognin, Exploiting the linear organisation of omics network embedding spaces<\/a><\/div>\n\n\n\n

Theoretical biology<\/strong>, Hall Nikola Tesla 2<\/span>

\"\"10:00-10:30 Elena Fimmel, Circular Codes in the Genetic Information<\/a>
\"\"10:30-11:00 Alex Bateman, Using AI\/ML to transform molecular biology databases<\/a><\/div>\n\n\n\n

Meet the expert session<\/strong>, Hall Lavander<\/span>

10:00-11:00 Prof. Dr. Peter Tompa and Prof. Dr. Sean Mooney<\/div>\n\n\n\n

COST Action CA21169 meeting<\/a><\/strong>, Hall Aristotel<\/p>\n<\/div>\n<\/div>\n\n\n\n

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11:00-11:30<\/p>\n<\/div>\n\n\n\n

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Coffee Break<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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11:30-13:30<\/p>\n<\/div>\n\n\n\n

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NGS Challenge<\/a><\/strong>, Hall Nikola Tesla 1<\/p>\n<\/div>\n<\/div>\n\n\n\n

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13:30-14:30<\/p>\n<\/div>\n\n\n\n

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Lunch<\/strong>, Restaurant<\/p>\n<\/div>\n<\/div>\n\n\n\n

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14:30-15:30<\/p>\n<\/div>\n\n\n\n

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Keynote lecture<\/strong>, Hall Nikola Tesla 1<\/p>\n\n\n\n

Prof. Dr. Sean Mooney<\/p>\n\n\n\n

Translating Bioinformatics Back To Healthcare: Facilitating the use of Artificial Intelligence at UW Medicine<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

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15:30-16:30<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/strong><\/p>\n\n\n\n

Poster session with flash talk<\/strong>, Hall Lavander<\/span>

Isidora Pantovic<\/em>, Evaluation of variant calling tools for detection of SNVs in BRCA1 and BRCA2 genes in patients from the Institute of Oncology and Radiology of Serbia<\/a>
Jovana Dobreva<\/em>, Analysis of Long COVID Phenotypes and their Impact on Mental Health and Daily Functioning: Insights from Twitter<\/a>
Marianna Lucafo<\/em>, Transcriptomic profiling of white blood cells reveals new insights into the molecular mechanisms of thalidomide in children with inflammatory bowel disease<\/a>
Marija Mijovic<\/em>, Potentially relevant variants of unknown significance in NGS-tested patients with suspected skeletal dysplasia<\/a>
Marina Popovic Krneta<\/em>, Supervised Machine Learning Approach for Prediction of Occult Lymph Node Metastasis in T1-T2 Papillary Thyroid Carcinoma<\/a>
Milan Stefanovic<\/em>, Pathway analysis of CD8+ T cell transcriptome in glioblastoma patients reveals multiple sclerosis signaling pathway as the top rated upregulated disease pathway in tumor infiltrating cells<\/a>
Nevena Ciric<\/em>, Methodology, performance and retrainability survey of intrinsic disorder predictors<\/a>
Nikola Kotur<\/em>, Genome-wide association analysis for severe COVID-19 in Serbian population<\/a>
Stefan Kapunac<\/em>, Analysis of nucleotide sequence repeats in coronaviruses<\/a>
Vladimir Ga\u0161i\u0107<\/em>, In Silico analysis and prediction of novel pharmacogenomic markers of pediatric ALL treatment<\/a><\/div>\n\n\n\n

COST Action CA21169 meeting<\/a><\/strong>, Hall Aristotel<\/p>\n<\/div>\n<\/div>\n\n\n\n

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16:30-17:00<\/p>\n<\/div>\n\n\n\n

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Coffe break<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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17:00-18:30<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/p>\n\n\n\n

Macromolecular Sequence, Structure, and Function<\/strong>, Hall Nikola Tesla 1<\/span>

\"\"17:00-17:25 Vladimir Uversky (online), From multifunctionality to polypathogenicity with intrinsic disorder<\/a>
\"\"17:25-17:50 Alexandre de Brevern, An agnostic analysis of the human AlphaFold2 proteome using local protein conformations<\/a>
\"\"17:50-18:05 Milan Sen\u0107anski, Dehydrins in the service of protecting the DNA helix from the aspect of molecular dynamics (MD)<\/a>
\"\"18:05-18:20 Marija Vidovi\u0107, Integration of differential transcriptomic and proteomic data in hydrated and desiccated leaves of Ramonda serbica Panc.<\/a><\/div>\n\n\n\n

Spatial Transcriptomics<\/strong>, Hall Nikola Tesla 2<\/span>

\"\"17:00-17:25 Javier Batista Perez, Stereo-seq: Large Field of View-Spatially Resolved Transcriptomics at Nanoscale Resolution<\/a>
\"\"17:25-17:50 Shuangsang Fang, The complete solution and interpretation algorithms for large field-of-view and high-resolution spatial transcriptomics<\/a>
\"\"17:50-18:05 Maria Louise Elkj\u00e6r, Cell-type-specific mechanistic drivers of progressive multiple sclerosis lesions<\/a>
\"\"18:05-18:15 Sponsor session<\/em> 10X Genomics<\/div>\n\n\n\n

Meet the expert session<\/strong><\/span>

17:00-18:00 Prof. dr. Carlo Cannistraci and Prof. dr. Nata\u0161a Pr\u017eulj<\/div>\n\n\n\n

COST Action CA21169 meeting<\/a><\/strong>, Hall Aristotel<\/p>\n<\/div>\n<\/div>\n\n\n\n

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18:30-20:30<\/p>\n<\/div>\n\n\n\n

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City tour Tuesday<\/a><\/em><\/p>\n<\/div>\n<\/div>\n\n\n\n

Wednesday, June 21, 2023<\/h2>\n\n\n\n
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08:00-09:00<\/p>\n<\/div>\n\n\n\n

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Registration<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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09:00-10:00<\/p>\n<\/div>\n\n\n\n

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Keynote lecture<\/strong>, Hall Nikola Tesla 1
Prof. Dr. Yuriy Orlov
Bioinformatics education course on gene networks reconstruction using online tools<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

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10:00-11:00<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/p>\n\n\n\n

Gene expression regulation and genetic code<\/strong>, Hall Nikola Tesla 1<\/span>

\"\"10:00-10:30 Vladimir Babenko (online), Complexity driven evolution of Alternative splicing<\/a>
\"\"10:30-10:45 Lena Maria Hackl, Alternative splicing impacts microRNA regulation within coding regions<\/a><\/div>\n\n\n\n

WORKSHOP<\/strong>, Hall Nikola Tesla 2<\/span>


10:00-11:00 Andrea Gelemanovi\u0107<\/strong>: Challenges and opportunities of using publicly available RNA-seq data<\/strong>
This workshop is designed to introduce the participants to the various challenges and opportunities when using publicly available RNA-seq data. It will cover the theoretical background of the main concepts of RNA-seq data analysis, where participants will be guided through the entire process from acquiring raw RNA sequences to differential gene expression analysis, followed by various options for follow-up analyses. Publicly available data repositories with a focus on transcriptomics data will be discussed. Participants will get a theoretical introduction on how to use various software and web-based platforms and tools to perform their own RNA-seq data analyses. Participants will have the opportunity to ask questions about their own RNA-seq projects.<\/div>\n\n\n\n

Computational systems biology<\/strong>, Hall Lavander<\/span>

\"\"10:00-10:30 Oxana Galzitskaya, To be folded, to be unfolded or to be aggregated with important functions: application of the directed coaggregation mechanism to combat bacterial communities<\/a>
\"\"10:30-11:00 Mikhail S. Gelfand, Bioinformatics and evolution of non-model organisms<\/a><\/div>\n\n\n\n

COST Action CA21169 meeting<\/a><\/strong>, Hall Aristotel<\/p>\n<\/div>\n<\/div>\n\n\n\n

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11:00-12:00<\/p>\n<\/div>\n\n\n\n

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Coffee Break with Poster viewing<\/strong>, Lobby & Hall Lavander<\/span>


Ahmed Musa<\/em>, Machine learning-based data correlation between scanning electron microscopy images and energy-dispersive X-ray spectroscopy profiles<\/a>
Alessia Norbedo<\/em>, PACSIN2 modifies miRNAs in extracellular vesicles, modulating thiopurine response<\/a>
Ana Pantelic<\/em>, Two contrasting late embryogenesis abounded protein family groups of Ramonda serbica Panc.<\/a>
Andjelo Beletic <\/em>, Mining for the data about glycosylation in the bovines-the analysis of the recently published studies<\/a>
Aydin Akbudak<\/em>, Genetic Complexity and Synteny Analysis of Castanea Genomes: Unveiling the Significance of Chestnut Species in Ecological and Genomic Perspectives<\/a>
Barbara Jenko Bizjan<\/em>, Different approaches in microRNA analysis<\/a>
Bojana Ilic<\/em>, Combined experimental and theoretical study of Type-II toxin-antitoxin system response to antibiotics<\/a>
Danijela Drakulic<\/em>, Application of principal component analysis (PCA) and analytical hierarchy process (AHP) in analysis of articulatory characteristics of phonemes of children with 22q11.2 Deletion Syndrome<\/a>
Dejana Milic<\/em>, Efficient bioinformatics workflow for de novo transcriptome assembly of Pelargonium zonale<\/a>
Despina Miseva\/Jovana Dobreva<\/em>, Exploring Changes in Diagnoses during the COVID-19 Era: Comparative Analysis<\/a>
Dusan Radojevic<\/em>, Shotgun metagenomics reveals gut microbiota features associated with the efficacy of myeloid derived suppressor cells in the prevention of neuroinflammation<\/a>
Iva Pruner<\/em>, Data mining for long-non coding RNAs deregulated in colon cancer through analysis of Gene Expression Omnibus database<\/a>
Ivan Tanasijevi\u0107<\/em>, Comparative study of in silico protein design techniques<\/a>
Ivana Galic<\/em>, Root colonization ability of herbicide-resistant PGP bacteria evaluated by 16S rRNA metabarcoding<\/a>
Jelena Kusic Tisma<\/em>, Profiling Pre-Replication Complex Mutations in Cancer<\/a>
Jovana Aran\u0111elovi\u0107<\/em>, Deciphering the reward-related impulsivity domains in rats: The big data study of historical control<\/a>
Lazar Vasovic<\/em>, The past, the present, and the future of RNA secondary structure prediction<\/a>
Marija Atanaskovic<\/em>, In silico pre-selection of \u03b2-glucosidase gene for heterologous recombinant expression<\/a>
Marina Parr<\/em>, Elongation factor P (-like) protein and polyproline motifs<\/a>
Milica Ciric<\/em>, Groundwater and soil as a reservoir for polyurethane-degrading bacteria<\/a>
Mirjana Novkovic<\/em>, Genomic Surveillance and Phylogenetic Analysis of SARS-CoV-2 Variants in Serbia: Insights into Evolutionary Dynamics and Genetic Diversity<\/a>
Nika Marolt <\/em>, Possible role of estrogen metabolism and aldo-keto reductase activity in chemoresistance of ovarian cancer<\/a>
Polina Iarema and Vasilisa Turkina<\/em>, Computer analysis of glioma gene network structure<\/a>
Slobodan Davidovic<\/em>, Evaluating ND1 and Cytb mitochondrial genes as markers for diversity analysis of protected White-tailed eagle species from Serbia<\/a>
Vasilije Matic <\/em>, Energy and information exchange between \u201cdonor\u201d and \u201cmolecular bridge\u201d structures: non adiabatic polaron model<\/a>
Yury A. Barbitoff<\/em>, Seeking an optimal variant calling pipeline for medical genetics<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n
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12:00-13:30<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/p>\n\n\n\n

Bioinformatics databases and algorithms<\/strong>, Hall Nikola Tesla 1<\/span>

\"\"12:00-12:30 Travis Gagie, Pangenomic Alignment: Strings plus Graphs<\/a>
\"\"12:30-13:00 Evgeina K Kriventseva, Advancing Genomics with OrthoDB, BUSCO, and the LEM Framework<\/a>
\"\"13:00-13:15 Junli Xu, AI-powered framework to predict the toxicity of microplastics<\/a><\/div>\n\n\n\n

WORKSHOP<\/strong>, Hall Nikola Tesla 2<\/span>


12:00-13:00 Andrea Gelemanovi\u0107<\/strong>: Challenges and opportunities of using publicly available RNA-seq data<\/strong>
This workshop is designed to introduce the participants to the various challenges and opportunities when using publicly available RNA-seq data. It will cover the theoretical background of the main concepts of RNA-seq data analysis, where participants will be guided through the entire process from acquiring raw RNA sequences to differential gene expression analysis, followed by various options for follow-up analyses. Publicly available data repositories with a focus on transcriptomics data will be discussed. Participants will get a theoretical introduction on how to use various software and web-based platforms and tools to perform their own RNA-seq data analyses. Participants will have the opportunity to ask questions about their own RNA-seq projects.<\/div>\n\n\n\n

Computational biology of COVID-19<\/strong>, Hall Lavander<\/span>

\"\"12:00-12:30 Jose Vilar, Inverting convolutional neural networks for super-resolution identification of regime changes in epidemiological time series<\/a>
\"\"12:30-12:50 Sofija Markovic, Machine learning approach in inferring main population-level COVID-19 risk factors<\/a>
\"\"12:50-13:10 Andjela Rodic, Beyond the Global Health Security Index: A Machine Learning Approach to Analyzing the Official COVID-19 Deaths and Excess Deaths Data<\/a>
\"\"13:10-13:30 Sa\u0161a Malkov, Clustering and classification of SARS-COV-2 isolates using RSCU<\/a><\/div>\n\n\n\n

COST Action CA21169 meeting<\/a><\/strong>, Hall Aristotel<\/p>\n<\/div>\n<\/div>\n\n\n\n

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13:30-14:30<\/p>\n<\/div>\n\n\n\n

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Lunch<\/strong>, Restaurant<\/p>\n<\/div>\n<\/div>\n\n\n\n

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14:30-22:00<\/p>\n<\/div>\n\n\n\n

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Excursion<\/a><\/em><\/p>\n<\/div>\n<\/div>\n\n\n\n

Thursday, June 22, 2023<\/h2>\n\n\n\n
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08:00-09:00<\/p>\n<\/div>\n\n\n\n

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Registration<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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09:00-10:00<\/p>\n<\/div>\n\n\n\n

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BIO4 presentation<\/strong>, Hall Nikola Tesla 1<\/span>

9:00-9:25 Nenad Paunovi\u0107<\/em> – Director for IT and Entrepreneurship in the Office of the Prime Minister.
9:25-9:33 Dr. Goran Jovanovi\u0107<\/em> – Assistant Director for Science, Instite of Molecular Genetics and Genetic Engineering, University of Belgrade
9:32-9:40 Dr. Matija Zlatar<\/em> – Senior Researcher and the Coordinator of the Institute’s Transformation Team within the SAIGE project, University of Belgrade, Institute of Chemistry, Technology, and Metallurgy, National institute of the republic of Serbia
9:40-9:48 Dr. Sanja Brdar<\/em> – Head of the Information Technology Center, BioSens Institute
9:48-9:56 Jelena Petrovi\u0107<\/em> – Assistant Director for Innovation Entrepreneurship Development. Science and Technology Park Belgrade<\/div>\n<\/div>\n<\/div>\n\n\n\n
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10:00-11:00<\/p>\n<\/div>\n\n\n\n

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Panel: Serbia\u2019s resources for storage and analyses of genetic data<\/a><\/strong>, Hall Nikola Tesla 1<\/p>\n<\/div>\n<\/div>\n\n\n\n

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11:00-11:30<\/p>\n<\/div>\n\n\n\n

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Coffee Break<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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11:30-12:00<\/p>\n<\/div>\n\n\n\n

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Panel: Serbia\u2019s resources for storage and analyses of genetic data<\/a><\/strong>, Hall Nikola Tesla 1<\/p>\n<\/div>\n<\/div>\n\n\n\n

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12:00-12:30<\/p>\n<\/div>\n\n\n\n

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Sponsor Session Huawei<\/strong>, Hall Nikola Tesla 1<\/p>\n<\/div>\n<\/div>\n\n\n\n

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12:30-13:30<\/p>\n<\/div>\n\n\n\n

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Poster session with flash talk<\/strong>, Hall Lavander<\/span>

Andjela Djokic<\/em>, Transcriptome analysis of Pseudomonas aeruginosa after MhqO dioxygenase treatment<\/a>
Bojana Banovic<\/em>, Impact of different mapping tools on detection of small RNAs in bacterial outer membrane vesicles<\/a>
Bojana Josic<\/em>, Integrated relational database of human protein-protein interactions<\/a>
Iva Sabolic<\/em>, Developing bioinformatics pipeline for processing environmental DNA metabarcoding sequencing data<\/a>
Ivana Prodic<\/em>, The use of tryptic food protein digests data in public proteomic repositories to assess the effects of chemical and post-translational modifications on digestion outcomes<\/a>
Jovana Curcic<\/em>, Metagenomic Analysis of Bacterial Community and Isolation of Representative Strains from Vranjska Banja Hot Spring, Serbia<\/a>
Katarina Virijevic<\/em>, Numerical and Biological Modeling Approach in the Analysis of the Cancer Viability and Apoptosis<\/a>
Manja Bo\u017ei\u0107<\/em>, Seven miRNAs potentially included in the chilling response of maize plants in early stages of development<\/a>
Marija Vidovic<\/em>, Protein structural differences in Cytochrome c oxidase subunit 1 of two Heterogynis species as a new approach for species delimitation<\/a>
Marko Tumbas<\/em>, Determinants of CRISPR array non-canonical adaptation mechanism<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n
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13:30-14:30<\/p>\n<\/div>\n\n\n\n

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Lunch<\/strong>, Restaurant<\/p>\n<\/div>\n<\/div>\n\n\n\n

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14:30-16:00<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/p>\n\n\n\n

Computational Bioengineering<\/strong>, Hall Nikola Tesla 1<\/span>

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\"\"14:30-14:55 Themis Exarchos (online), Development of hybrid and optimized deep learning classifiers for speech recognition in tracheostomy patients: a case study<\/a>
\"\"14:55-15:20 Nenad Filipovic, Computational bioengineering for heart disease<\/a>
\"\"15:20-15:35 Bogdan Milicevic, Echocardiography-based Left Ventricle Cardiac Hypertrophy Simulations<\/a>
\"\"15:35-15:50 Aleksandra Vulovic, Application of classification algorithms for hip implant surface topographies<\/a>
\"\"15:50-16:05 Smiljana Tomasevic, Computational Modelling of Drug Effects on Cardiomyopathy and Analysis of Myocardial Work<\/a><\/div>\n\n\n\n

AI\/ML in biology and medicine<\/strong>, Hall Nikola Tesla 2<\/span>

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\"\"14:30-15:00 Anirvan Sengupta (online), A Similarity-based Normative Framework for Bio-plausible Neural Nets<\/a>
\"\"15:00-15:30 Mladen Nikolic, Some Applications of Graph-Based Machine Learning Methods on Biological Data<\/a>
\"\"15:30-15:45 Milo\u0161 Ko\u0161prdi\u0107, Zero- and Few-Shot Machine Learning for Named Entity Recognition in Biomedical Texts<\/a>
\"\"15:45-16:00 An\u0111elka Ze\u010devi\u0107, Mapping of Disease Names to Disease Codes based on Natural Language Processing Techniques<\/a><\/div>\n\n\n\n

Precision Medicne and Precision Pharmacology<\/strong>, Hall Lavander<\/span>

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\"\"14:30-14:55 George Patrinos, Computational tools and repositories for precision therapeutics in the post-genomic era<\/a>
\"\"14:55-15:20 Alexander Skupin, Multiomics Integration by Non-Negative Tri-Matrix Factorization Reveals New Target Genes in Parkinson\u2019s Disease<\/a>
\"\"15:20-15:40 Andrea Gelemanovic, Can we use biobanks to study infectious diseases?<\/a>
<\/div>\n<\/div>\n<\/div>\n\n\n\n

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15:15-16:45<\/p>\n<\/div>\n\n\n\n

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PHARMGENHUB thematic workshop<\/strong>, Hall Aristotel<\/span>


15:15-15:25 Branka Zuki\u0107, PharmGenHUB in Western Balkan Project
15:25-15:40 Branka Zuki\u0107, Next Generation Sequencing (NGS) Technology
15:40-16:00 Nikola Kotur, Bioinformatic preprocessing of NGS data: from raw data to genetic variants
16:20-16:40 Nikola Kotur, Bioinformatics resources in pharmacogenomics research
16:40-17:00 Vladimir Gasi\u0107, Interpretation of NGS Results: analysis of pharmacogenomics variants<\/div>\n<\/div>\n<\/div>\n\n\n\n
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16:00-17:00<\/p>\n<\/div>\n\n\n\n

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Business coffee break<\/strong>, Hall Lavander<\/span>

1. elMed
2. HealthLY
3. Baby FM
4. DIVS
5. CLM startap
6. Atfield
7. Veles Sense
8. Viabio<\/div>\n<\/div>\n<\/div>\n\n\n\n
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16:30-17:00<\/p>\n<\/div>\n\n\n\n

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Coffe break<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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17:00-18:00<\/p>\n<\/div>\n\n\n\n

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Keynote lecture<\/strong>, Hall Nikola Tesla 1
Prof. Dr. Predrag Radivojac (online)
A New Framework for the Use of Variant Interpretation Tools in Clinical Practice<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

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18:45-20:00<\/p>\n<\/div>\n\n\n\n

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City tour Thursday<\/a><\/em><\/p>\n<\/div>\n<\/div>\n\n\n\n

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20:30-23:30<\/p>\n<\/div>\n\n\n\n

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Gala Diner<\/em>, Restaurant “Kova\u010d”<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

Friday, June 23, 2023<\/h2>\n\n\n\n
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08:00-09:00<\/p>\n<\/div>\n\n\n\n

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Registration<\/strong>, Lobby<\/p>\n<\/div>\n<\/div>\n\n\n\n

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09:00-10:00<\/p>\n<\/div>\n\n\n\n

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Keynote lecture<\/strong>, Hall Nikola Tesla 1
Prof. Dr. Jan Baumbach
Privacy-preserving federated systems medicine<\/a><\/p>\n<\/div>\n<\/div>\n\n\n\n

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10:00-11:30<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/p>\n\n\n\n

AI\/ML in biology and medicine<\/strong>, Hall Nikola Tesla 1<\/span>

\"\"10:00-10:20 Goran Rakocevic, Using AI to design antibodies<\/a>
\"\"10:20-10:40 Niklas Probul, Newest Advances on the FeatureCloud Platform for Federated Learning in Biomedicine<\/a>
\"\"10:40-11:00 Olga Tsoy, From protein-protein to isoform-isoform interactions: the toolkit to map alternative splicing to interactome<\/a>
\"\"11:00-11:20 Mhaned Oubounyt, Deciphering key regulatory networks and drug repurposing candidates through scRNAseq data analysis using SCANet<\/a>
<\/div>\n\n\n\n

STREAMLINE thematic workshop<\/a><\/strong>, Hall Nikola Tesla 2<\/p>\n\n\n\n

BirBI: Promotion of the Genomics Section<\/strong>, Hall Lavander<\/p>\n<\/div>\n<\/div>\n\n\n\n

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11:30-12:30<\/p>\n<\/div>\n\n\n\n

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Coffee Break with Poster viewing<\/strong>, Lobby & Hall Lavander<\/span>


Ahmed Musa<\/em>, Machine learning-based data correlation between scanning electron microscopy images and energy-dispersive X-ray spectroscopy profiles<\/a>
Alessia Norbedo<\/em>, PACSIN2 modifies miRNAs in extracellular vesicles, modulating thiopurine response<\/a>
Ana Pantelic<\/em>, Two contrasting late embryogenesis abounded protein family groups of Ramonda serbica Panc.<\/a>
Andjelo Beletic <\/em>, Mining for the data about glycosylation in the bovines-the analysis of the recently published studies<\/a>
Aydin Akbudak<\/em>, Genetic Complexity and Synteny Analysis of Castanea Genomes: Unveiling the Significance of Chestnut Species in Ecological and Genomic Perspectives<\/a>
Barbara Jenko Bizjan<\/em>, Different approaches in microRNA analysis<\/a>
Bojana Ilic<\/em>, Combined experimental and theoretical study of Type-II toxin-antitoxin system response to antibiotics<\/a>
Danijela Drakulic<\/em>, Application of principal component analysis (PCA) and analytical hierarchy process (AHP) in analysis of articulatory characteristics of phonemes of children with 22q11.2 Deletion Syndrome<\/a>
Dejana Milic<\/em>, Efficient bioinformatics workflow for de novo transcriptome assembly of Pelargonium zonale<\/a>
Despina Miseva\/Jovana Dobreva<\/em>, Exploring Changes in Diagnoses during the COVID-19 Era: Comparative Analysis<\/a>
Dusan Radojevic<\/em>, Shotgun metagenomics reveals gut microbiota features associated with the efficacy of myeloid derived suppressor cells in the prevention of neuroinflammation<\/a>
Iva Pruner<\/em>, Data mining for long-non coding RNAs deregulated in colon cancer through analysis of Gene Expression Omnibus database<\/a>
Ivan Tanasijevi\u0107<\/em>, Comparative study of in silico protein design techniques<\/a>
Ivana Galic<\/em>, Root colonization ability of herbicide-resistant PGP bacteria evaluated by 16S rRNA metabarcoding<\/a>
Jelena Kusic Tisma<\/em>, Profiling Pre-Replication Complex Mutations in Cancer<\/a>
Jovana Aran\u0111elovi\u0107<\/em>, Deciphering the reward-related impulsivity domains in rats: The big data study of historical control<\/a>
Lazar Vasovic<\/em>, The past, the present, and the future of RNA secondary structure prediction<\/a>
Marija Atanaskovic<\/em>, In silico pre-selection of \u03b2-glucosidase gene for heterologous recombinant expression<\/a>
Marina Parr<\/em>, Elongation factor P (-like) protein and polyproline motifs<\/a>
Milica Ciric<\/em>, Groundwater and soil as a reservoir for polyurethane-degrading bacteria<\/a>
Mirjana Novkovic<\/em>, Genomic Surveillance and Phylogenetic Analysis of SARS-CoV-2 Variants in Serbia: Insights into Evolutionary Dynamics and Genetic Diversity<\/a>
Nika Marolt <\/em>, Possible role of estrogen metabolism and aldo-keto reductase activity in chemoresistance of ovarian cancer<\/a>
Polina Iarema and Vasilisa Turkina<\/em>, Computer analysis of glioma gene network structure<\/a>
Slobodan Davidovic<\/em>, Evaluating ND1 and Cytb mitochondrial genes as markers for diversity analysis of protected White-tailed eagle species from Serbia<\/a>
Vasilije Matic <\/em>, Energy and information exchange between \u201cdonor\u201d and \u201cmolecular bridge\u201d structures: non adiabatic polaron model<\/a>
Yury A. Barbitoff<\/em>, Seeking an optimal variant calling pipeline for medical genetics<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n
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12:30-13:30<\/p>\n<\/div>\n\n\n\n

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PARALLEL SESSIONS<\/mark><\/strong><\/p>\n\n\n\n

Bioinformatics databases and algorithms<\/strong>, Hall Nikola Tesla 1<\/span>

\n\n\n\n

\"\"12:30-12:55 Jorge Duitama, An integrated platform for genome assembly, comparative genomics and management of genomic variation databases<\/a>
\"\"12:55-13:10 Andreas Maier, Drugst.One \u2013 A plug-and-play solution for online systems medicine and network-based drug repurposing<\/a>
\"\"13:10-13:20 Aleksandar Veljkovic, Semantic unification and search of bioinformatics databases<\/a>
\"\"13:20-13:30 Drenka Trivanovi\u0107, Fatty Acid Data Analysis Unravels Skeletal Site and Age-Specific Features of Human Bone Marrow Adiposity<\/a><\/div>\n\n\n\n

Precision medicine and Precision pharmacology<\/strong>, Hall Nikola Tesla 2<\/span>

\n\n\n\n

\"\"12:30-13:00 Andrea Ciliberto, Uncovering resistance to microtubule targeting drugs<\/a>
\"\"13:00-13:15 Klaudia Adamowicz, Online in silico validation of disease and gene sets, clusterings or subnetworks with DIGEST<\/a>
\"\"13:15-13:30 Michael Hartung, CADDIE \u2013 An online knowledge base for network-based mechanism exploration and drug repurposing in oncology<\/a><\/p>\n\n\n\n<\/div>\n\n\n\n

Genetic data<\/strong>, Hall Lavander<\/span>

\n\n\n\n

\"\"12:30-13:00 Ivan Jovanovi\u0107, Exploring the impact of rare Copy Number Variants on miRNA genes in CAKUT: Insights from integrated bioinformatic analysis and experimental validation<\/a>
\"\"13:00-13:15 Du\u0161an U\u0161jak, Using whole exome sequencing to explore genetic basis of unicuspid aortic valve disease<\/a>
\"\"13:15-13:30 Aleksandra Divac Rankov, Decoding Cystic Fibrosis Phenotype<\/a><\/div>\n<\/div>\n<\/div>\n\n\n\n

\n
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13:30-14:30<\/p>\n<\/div>\n\n\n\n

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Lunch<\/strong>, Restaurant<\/p>\n<\/div>\n<\/div>\n\n\n\n

\n
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14:30-15:00<\/p>\n<\/div>\n\n\n\n

\n

Closing ceremony<\/strong><\/p>\n<\/div>\n<\/div>\n\n\n\n

\n
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17:30-20:00<\/p>\n<\/div>\n\n\n\n

\n

City tour Friday<\/a><\/em><\/p>\n<\/div>\n<\/div>\n","protected":false},"excerpt":{"rendered":"

Monday, June 19, 2023 09:00-11:00 Registration, Lobby 11:00-11:30 Opening Ceremony, Hall Nikola Tesla 1 11:30-12:30 Keynote lecture, Hall Nikola Tesla 1Prof. Dr. Ewan Birney (online)Big Data in Biology: How EMBL delivers big data for biology, and some highlights of its application to human disease 12:30-13:30 Keynote lecture, Hall Nikola Tesla\u2026<\/p>\n

Continue reading<\/span><\/i><\/a> <\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"yoast_head":"\nFinal Program - BelBi 2023<\/title>\n<meta name=\"description\" content=\"Belgrade Bioinformatics Conference - BelBi 2023: View the program in a full schedule and explore the parallel sessions.\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/archive.belbi.bg.ac.rs\/2023\/program\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Final Program - BelBi 2023\" \/>\n<meta property=\"og:description\" content=\"Belgrade Bioinformatics Conference - BelBi 2023: View the program in a full schedule and explore the parallel sessions.\" \/>\n<meta property=\"og:url\" content=\"https:\/\/archive.belbi.bg.ac.rs\/2023\/program\/\" \/>\n<meta property=\"og:site_name\" content=\"BelBi 2023\" \/>\n<meta property=\"article:modified_time\" content=\"2023-07-14T15:35:08+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/archive.belbi.bg.ac.rs\/2023\/wp-content\/uploads\/2023\/06\/IS-icon.svg\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"25 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/archive.belbi.bg.ac.rs\/2023\/program\/\",\"url\":\"https:\/\/archive.belbi.bg.ac.rs\/2023\/program\/\",\"name\":\"Final Program - 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