Final Program

Registration, Lobby

Opening Ceremony, Hall Nikola Tesla 1

Keynote lecture, Hall Nikola Tesla 1
Prof. Dr. Ewan Birney (online)
Big Data in Biology: How EMBL delivers big data for biology, and some highlights of its application to human disease

Keynote lecture, Hall Nikola Tesla 1

Prof. Dr. Kristel Van Steen

A tale of two stories: data-driven precision medicine and precision public health

Foody Coffee, Lobby

Keynote lecture, Hall Nikola Tesla 1

Prof. Dr. Carlo Cannistraci
Machine intelligence and network science for complex systems big data analysis

Sponsors exibition viewing, Lobby

PARALLEL SESSIONS

Single cell omics, Hall Nikola Tesla 1

16:00-16:30 Vladimir Brusic, Prediction of cell types using single-cell mRNA profiles
16:30-16:45 Uršula Prosenc, Exploration of Pharmacogenomic Biomarkers in Chronic Immune Diseases Using Single-Cell RNA Sequencing
16:45-17:00 Nevena Milivojević, Single cell 3` transcriptome profiling
17:00-17:15 Sponsor session 10X Genomics

Computational systems biology, Hall Nikola Tesla 2

16:00-16:30 Konstantin Severinov, Stochastic variation of intracellular amounts of restriction-modification enzymes allows phages to overcome the RM defence
16:30-16:50 Marko Djordjevic, Modulating Horizontal Gene Transfer through Bistability in the Dynamics of Bacterial Restriction-Modification Systems
16:50-17:10 Bogdan Kirillov, The use of Active Machine Learning for Protospacer-Adjacent Motif recovery in Class 2 CRISPR-Cas systems

City tour Monday

Welcome Coctail, Hall Nikola Tesla 1

Registration, Lobby

Keynote lecture, Hall Nikola Tesla 1
Prof. Dr. Peter Tompa
Targeting LLPS in disease: a new modality in drug development

PARALLEL SESSIONS

Omics data, Hall Nikola Tesla 1

10:00-10:30 Natasa Przulj, Omics Data Fusion for Understanding Molecular Complexity Enabling Precision Medicine
10:30-11:00 Noel Malod-Dognin, Exploiting the linear organisation of omics network embedding spaces

Theoretical biology, Hall Nikola Tesla 2

10:00-10:30 Elena Fimmel, Circular Codes in the Genetic Information
10:30-11:00 Alex Bateman, Using AI/ML to transform molecular biology databases

Meet the expert session, Hall Lavander

COST Action CA21169 meeting, Hall Aristotel

Coffee Break, Lobby

NGS Challenge, Hall Nikola Tesla 1

Lunch, Restaurant

Keynote lecture, Hall Nikola Tesla 1

Prof. Dr. Sean Mooney

Translating Bioinformatics Back To Healthcare: Facilitating the use of Artificial Intelligence at UW Medicine

PARALLEL SESSIONS

Poster session with flash talk, Hall Lavander

COST Action CA21169 meeting, Hall Aristotel

Coffe break, Lobby

PARALLEL SESSIONS

Macromolecular Sequence, Structure, and Function, Hall Nikola Tesla 1

17:00-17:25 Vladimir Uversky (online), From multifunctionality to polypathogenicity with intrinsic disorder
17:25-17:50 Alexandre de Brevern, An agnostic analysis of the human AlphaFold2 proteome using local protein conformations
17:50-18:05 Milan Senćanski, Dehydrins in the service of protecting the DNA helix from the aspect of molecular dynamics (MD)
18:05-18:20 Marija Vidović, Integration of differential transcriptomic and proteomic data in hydrated and desiccated leaves of Ramonda serbica Panc.

Spatial Transcriptomics, Hall Nikola Tesla 2

17:00-17:25 Javier Batista Perez, Stereo-seq: Large Field of View-Spatially Resolved Transcriptomics at Nanoscale Resolution
17:25-17:50 Shuangsang Fang, The complete solution and interpretation algorithms for large field-of-view and high-resolution spatial transcriptomics
17:50-18:05 Maria Louise Elkjær, Cell-type-specific mechanistic drivers of progressive multiple sclerosis lesions
18:05-18:15 Sponsor session 10X Genomics

Meet the expert session

COST Action CA21169 meeting, Hall Aristotel

City tour Tuesday

Registration, Lobby

Keynote lecture, Hall Nikola Tesla 1
Prof. Dr. Yuriy Orlov
Bioinformatics education course on gene networks reconstruction using online tools

PARALLEL SESSIONS

Gene expression regulation and genetic code, Hall Nikola Tesla 1

10:00-10:30 Vladimir Babenko (online), Complexity driven evolution of Alternative splicing
10:30-10:45 Lena Maria Hackl, Alternative splicing impacts microRNA regulation within coding regions

WORKSHOP, Hall Nikola Tesla 2

Computational systems biology, Hall Lavander

10:00-10:30 Oxana Galzitskaya, To be folded, to be unfolded or to be aggregated with important functions: application of the directed coaggregation mechanism to combat bacterial communities
10:30-11:00 Mikhail S. Gelfand, Bioinformatics and evolution of non-model organisms

COST Action CA21169 meeting, Hall Aristotel

Coffee Break with Poster viewing, Lobby & Hall Lavander

PARALLEL SESSIONS

Bioinformatics databases and algorithms, Hall Nikola Tesla 1

12:00-12:30 Travis Gagie, Pangenomic Alignment: Strings plus Graphs
12:30-13:00 Evgeina K Kriventseva, Advancing Genomics with OrthoDB, BUSCO, and the LEM Framework
13:00-13:15 Junli Xu, AI-powered framework to predict the toxicity of microplastics

WORKSHOP, Hall Nikola Tesla 2

Computational biology of COVID-19, Hall Lavander

12:00-12:30 Jose Vilar, Inverting convolutional neural networks for super-resolution identification of regime changes in epidemiological time series
12:30-12:50 Sofija Markovic, Machine learning approach in inferring main population-level COVID-19 risk factors
12:50-13:10 Andjela Rodic, Beyond the Global Health Security Index: A Machine Learning Approach to Analyzing the Official COVID-19 Deaths and Excess Deaths Data
13:10-13:30 Saša Malkov, Clustering and classification of SARS-COV-2 isolates using RSCU

COST Action CA21169 meeting, Hall Aristotel

Lunch, Restaurant

Excursion

Registration, Lobby

BIO4 presentation, Hall Nikola Tesla 1

Panel: Serbia’s resources for storage and analyses of genetic data, Hall Nikola Tesla 1

Coffee Break, Lobby

Panel: Serbia’s resources for storage and analyses of genetic data, Hall Nikola Tesla 1

Sponsor Session Huawei, Hall Nikola Tesla 1

Poster session with flash talk, Hall Lavander

Lunch, Restaurant

PARALLEL SESSIONS

Computational Bioengineering, Hall Nikola Tesla 1

AI/ML in biology and medicine, Hall Nikola Tesla 2

Precision Medicne and Precision Pharmacology, Hall Lavander

PHARMGENHUB thematic workshop, Hall Aristotel

Business coffee break, Hall Lavander

Coffe break, Lobby

Keynote lecture, Hall Nikola Tesla 1
Prof. Dr. Predrag Radivojac (online)
A New Framework for the Use of Variant Interpretation Tools in Clinical Practice

City tour Thursday

Gala Diner, Restaurant “Kovač”

Registration, Lobby

Keynote lecture, Hall Nikola Tesla 1
Prof. Dr. Jan Baumbach
Privacy-preserving federated systems medicine

PARALLEL SESSIONS

AI/ML in biology and medicine, Hall Nikola Tesla 1

10:00-10:20 Goran Rakocevic, Using AI to design antibodies
10:20-10:40 Niklas Probul, Newest Advances on the FeatureCloud Platform for Federated Learning in Biomedicine
10:40-11:00 Olga Tsoy, From protein-protein to isoform-isoform interactions: the toolkit to map alternative splicing to interactome
11:00-11:20 Mhaned Oubounyt, Deciphering key regulatory networks and drug repurposing candidates through scRNAseq data analysis using SCANet

STREAMLINE thematic workshop, Hall Nikola Tesla 2

BirBI: Promotion of the Genomics Section, Hall Lavander

Coffee Break with Poster viewing, Lobby & Hall Lavander

PARALLEL SESSIONS

Bioinformatics databases and algorithms, Hall Nikola Tesla 1

Precision medicine and Precision pharmacology, Hall Nikola Tesla 2

Genetic data, Hall Lavander

Lunch, Restaurant

Closing ceremony

City tour Friday